Gene sequences

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Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015809391.1_cds_XP_016495725.1_10016
CDS Infomation	[gene=LOC107814777] [db_xref=GeneID:107814777] [protein=DExH-box ATP-dependent RNA helicase DExH12-like] [protein_id=XP_016495725.1] [location=complement(join(125512..128700,128818..129207,130293..133259))] [gbkey=CDS]
Sequence	ATGTCGAACTTGGGGGGTGGTGCAGAGGCGCATGCACGTTTCAAACAGTATGAATACAGA GCTAACTCAAGTCTGGTACTAACCACTGATTCTCGTCCTCGTGACACACATGAACCCAGT GGCGAACCTGAATCGCTTTATGGTAAAATAGACCCAAAAACATTTGGTGATCGAGCTTAT AAGGGCAGACCTCCCGAATTAGATGAGAAACTTGAAAAGGCTAGGAAGAAGAAGGAGCGG CAGCGGGACCCACTTGTATCCGAACCCCCCACCAGGAAGAAGAGACGTTTACTTGTTCAG GAAGAAAGTGTTCTTACTTCAACTGAGGAAGGTGTTTACCAGCCTAAGACTAAGGAGACT AGGGCCGCTTATGAGGCTATGCTCAGTATGATTCAGCAGCAACTCGGCGGACAGCCGTTG AACATTGTGAGCGGGGCAGCTGATGAGATATTGGCTGTGTTGAAGAATGATAACTTTAAG AATCCTGACAAGAAGAAGGAAATTGAAAAGCTGTTGAATCCGATATCCAACCAGGTGTTC GATCAGTTGGTGTCAATTGGGCGACTCATCACTGATTATCAAGGCGATGGTGATGCTGCA GCGGTGTCTGGTGCAGGTGATGGTGATGAAGCTCTTGACGATGATGTCGGTGTAGCGGTT GAGTTCGAGGAGAATGAAGAGGAAGATGATGAAGAGAGTGACCTTGATGTGGTACCCGAT GATGAAGAGGATGATGATGATGTGCTGGAAGCTAATGGTTCTGGTGCTATGCAGATGGGC GGTGGCATTGATGATGATGAGATGCGCGAGGCGGATGAGGGTATGGCGTTGAATGTGCAG GACATGGATGCTTATTGGCTTCAGAGAAAGATCTCTCAAGCTTACGAGCAGCAGATTGAT CCGCAACAGAGCCAAAAGCTTGCTGAAGAGGTTCTTAAGATTCTTGCTGAAGGCGATGAT CGTGAAGTGGAAACCAAGTTACTGGTGCATCTCCAGTTTGATAAGTTCAGTCTCATCAAA TATCTTCTGCGGAACCGGCTAAAGGTAGTATGGGGTACCCGTCTTGCAAGGGCCGACGAG CAAGAGAAAAAGGAGATTGAAGAAGAGATGTTGGGTTTGGGGCCTGATCATGCCGCAATA TTAGGGCAGCTGCATGCTACTAGGGCTACCCCAAAAGAGAGGCAGAAGATTCTTGAAAAA AGCATTAGAGAAGAGGCTCGGCGTCTTAAAGATGAGACTGGTGTTGACGGTGATGGAGAA AGGAGGACGGCAGTTGTAGATAGAGACGTTGATAATGGTTGGTTACTGGGGCAGCGTCAG TTACTTGATCTTGACGACCTTGCATTTCATCAAGGCGGTTTGTTGATGGCAAATAAGAAA TGTGAGCTTCCAGTGGGGTCTTATAGGAATCATAAGAAGGGGTACGAGGAAGTTCACGTG CCTGCTTTGAAGCCAAAGCCACTAGCCGCTGGTGAAGAGCTCGTGAAGATATCCTCCATT CCGGAGTGGGCTCAACCAGCGTTCAGTGGGATGACACAATTGAACAGGGTGCAGAGCAAA GTATATGAGACTGCCCTCTTCTCTCCAGAGAACATTTTGCTCTGTGCTCCAACTGGTGCT GGGAAGACCAATGTAGCTATGCTCACTATACTTCAGCAAATTGCACTTAACCGCAACGAA GATGGATCATTCAACCACAACAATTATAAGATTGTATATGTGGCACCCATGAAAGCCCTT GTTGCTGAAGTGGTTGGTAATCTCTCCAAGCGTTTGGAACATTATGGTTTCCAGGTGAAA GAGTTGAGTGGCGATCAAACATTAACTCGTCAACAGATTGAAGAGACTCAAATTATTGTG ACTACCCCAGAGAAGTGGGATATTATAACCAGAAAGTCAGGCGATCGCACATATACACAG CTTGTTAAACTTCTTATTATTGATGAGATACATCTCCTGCATGACAACCGAGGTCCTGTC TTGGAGAGTATCATTGCGAGAACTATTAGACAGATTGAAACCACGAAAGAGCATATTCGG CTTGTTGGATTATCAGCAACTCTTCCAAATTATGAAGACGTGGCTGTGTTTTTGCGAGTT GATCTGGACAAAGGGCTCTTCCATTTTGACAATAGCTATAGACCTGTACCGTTGGCTCAA CAGTATATTGGAATTACTGTTAAGAAGCCACTGCAGAGATTCCAGTTGATGAATGATGTT TGCTATGAGAAGGTGATTAGCGTTGCAGGCAAGCATCAAGTGCTTATTTTTGTGCATTCA AGGAAGGAAACAAGTAAAACAGCTCGGGCAATAAGGGATACTGCGCTTGCTAATGACACC CTTGGAAAGTTTTTGAAGGAGGAGAGTGTAGCTCGGGAGATTCTACAGTCTCATACTGAG CTTGTCAAGAGCAATGACCTCAAAGATCTTTTACCGTATGGCTTTGCAATTCACCATGCA GGGTTGGTTAGAACTGATCGGCAACTTGTGGAGGAGCTTTTTGCTGATGGTCATGTGCAA GTGTTGGTTTCAACTGCAACTTTAGCATGGGGTGTCAATTTACCTGCACATACCGTCATC ATAAAGGGTACCCAGATTTACAATCCTGAAAAAGGAGCATGGACTGAACTCAGTCCTCTT GATGTTATGCAAATGCTTGGCCGTGCTGGAAGGCCTCAATATGACACTTATGGTGAAGGA ATCATCATAACTGGACACAGTGAATTGCAGTATTATCTTTCTTTGATGAATCAGCAGCTT CCTATTGAAAGTCAGTTCATATCCAAGTTGGCTGATCAGTTGAATGCAGAGATTGTCCTT GGGACAGTACTGAATGCCAAAGAAGCATGCAAGTGGCTCCTATATACTTACCTCTATGTT CGCATGGTGCGGAATCCCACACTCTATGGTCTAGCTGCTGATGCTCTCAAAACTGATTAT ACTTTGGAGGAAAGGCGTGCCGACTTGGTCCATTCTGCTGCTACATTGCTGGACAAGAAT AACTTGGTCAAGTATGATAGGAAAAGTGGATATTTCCAGGTGACTGACTTGGGTCGTATT GCGAGCTATTATTATATAACTCATGGGACAATCTCCACATACAATGAGCATTTGAAGCCT ACGATGGGTGATATTGAACTTTGTCGGCTTTTCTCTCTAAGTGAGGAATTCAAATATGTA ACAGTCAGACAAGATGAGAAAATGGAATTGGCAAAGCTTCTGGATCGTGTTCCTATTCCA GTAAAAGAGAGTCTTGAGGAGCCTAGTGCCAAGATCAATGTTCTTTTGCAGGCATATATT TCACGGTTGAAGCTTGAAGGGTTGTCTCTGTCATCCGACATGGTTTATATAACTCAGAGT GCTGTGCGTCTGATGCGAGCCCTTTTTGAGATTGTTCTGAAGAGAGGATGGGCTCAGTTA GCTGAGAAGGCCTTAAAATGGTGCAAAATGATAAGCAAGAAGATGTGGAGTGTACAGACA CCACTTCGACAATTCCATGGCATACCAAATGAGATCTTGATGAAGTTAGAGAAGAAAGAT TTGGCTTGGGAGCGTTATTATGATCTTTCGTCACAAGAACTGGGAGAGCTTATTCGGTTC CAGAAGATGGGAAGGACGTTGCACAAGTTTATTCATCAGTTCCCAAAGCTGAATCTTGCA GCACATGTTCAACCGATTACCCGGTCAGTCTTGAGGGTAGAATTGACTATTACACCGGAT TTCCAGTGGGACGACAAGGTTCATGGTTTTGTAGAACCTTTCTGGGTGGTTGTTGAAGAT AATGATGGGGAATATATTCTTCATCATGAATATTTCATGTTGAAGAAGCAGTATATTGAT GAAGACCATACTGTGAACTTCACAGTCCCAATATATGAGCCATTGCCCCCTCAATATTTC ATCCGCGTTGTCTCTGACAGATGGCTAGGGTCCCAGACTGTTTTGCCTGTCTCTTTCCGA CACCTAATTTTGCCAGAAAAATATCCTCCTCCCACCGAGTTACTAGACTTACAACCTCTT CCAGTTACTGCATTGAGGAATCCAGCGTATGAAGCAGTTTATCAGGATTTTAAGCATTTC AATCCTGTTCAGACTCAGGTTTTCACAGTGCTGTACAATTCAGATGACAATGTCTTGGTT GCAGCTCCAACTGGTAGTGGGAAGACCATTTGTGCCGAATTTGCCATATTGAGGAATCTT CAGAAAGGCCCTGATAGTACCATTCGTGCTGTGTATATAGCTCCACTAGAGGCTCTTGCC AAGGAGCGGTTCAGTGATTGGAAGAAGAAATTTGGAGACTATCTGGGAATGAGAGTTGTT GAATTAACTGGGGAAACAGCCAGTGATCTGAAGCTGTTAGAGAAGGGTCAGTTAATTATC AGCACACCGGAGAAATGGGATGCTTTATCTCGTCGCTGGAAACAACGTAAGCATGTTCAG CAAGTCAGTCTTTTCATTGTTGATGAATTGCACCTGATTGGTGGTCAAGGTGGTCCAATC CTGGAGGTGATCGTCTCTCGGATGAGATATATTTCAAGCCAGATAGATAATAAGATCCGT ATCGTTGCTTTGTCAACCTCCCTAGCTAATGCCAAGGATTTGGGAGAATGGATTGGGGCT ACATCTCATGGGCTCTTCAACTTTCCTCCTGGTGTCAGGCCTGTGCCACTGGAGATACAC ATTCAGGGTGTTGATATTGCTAACTTTGAAGCTAGGATGCAAGCCATGGCAAAACCCACA TATACTGCAATAGTCCAACATGCAAGGAAGGGAAAACCTGCAATTGTGTATGTTCCCACG AGGAAGCATGCACGCTTGACTGCTGTTGATCTGATGACTTATTCAAGCATGGACAGCGAA GACACACCAATTTTCCTGCTACGATCTGCAGAAGAGCTGGAGCCTTTCGTGGAGAGGATC AATGAACCTATGCTGAAAGAGACACTCAAGTATGGTGTGGGCTACTTGCATGAGGGGTTG AGTGCCACTGATCTGGATATAGTGAAGACATTGTTCGAAACCGGTTGGATTCAAGTATGT GTAATGAACGGTACTATGTGTTGGGGAGTACCACTATCTGCACATTTGGTGGTGGTCATG GGAACACAGTACTATGATGGTAGGGAAAATGCGCACACTGATTACCCAGTTACCGATTTG TTGCAGATGATGGGTCATGCCAGTCGACCTCTTGTGGATAACTCTGGGAAGTGTGTCATC CTCTGCCATGCACCACGCAAGGACTACTACAAGAAGTTCTTGTATGAAGCATTCCCAGTT GAAAGCCATCTGCAACACTATCTCCATGACAATTTGAATGCTGAGGTTGTTGTTGGAGTT ATTCAGAACAAGCAGGATGCGGTGGATTACCTAACATGGACCTTCATGTACAGAAGGCTG ACACAGAATCCAAATTACTACAATCTGCAGGGTGTTAGTCATAGGCATCTGTCTGACCAC CTCTCGGAGCTAGTGGAGAATACCATCAGTGACTTGGAGGCAAGCAAATGTGTCGCTGTT GAGGATGACTTTTTGCTTTCACCTTTGAATCTTGGCATGATAGCGTCATATTATTATATC AGTTACACGACAATAGAGCGTTTTAGCTCTTCTGTGACGTCCAAAACAAAGTTGAAGGGC TTGCTGGAAATATTGGCTTCAGCATCGGAGTATGAACAGTTGCCTATACGACCAGGTGAA GAGGAGTTGATAAGAAGGTTGATTAAGCACCTGCGTTTCTCCTTTGAGAATCCGAAATAC ACAGATCCTCACATCAAGGCTAATGCTCTTTTACAAGCCCATTTCTCTAGGCAAGTGCTG GGTGGAAATCTTGCTTCTGACCAGCAAGAGGTGCTTCTTTCTTCTACTAGGCTGCTTCAA GCAATGGTTGATGTTATTTCCAGTAATGGGTGGCTTAGTCTAGCACTTCTAGCAATGGAG GTGAGCCAAATGGTGACACAGGGAATGTGGGAACGTGACTCGATGCTTCTCCAGCTTCCC CACTTCACGAAGGATTTGGCTAAGAAGTGCCAAGAAAATCCAGGAAAGAGTGTAGAGACA GTTTTTGATTTAGTGGAGCTGGAAGATGACGAGAGGCGTGAGCTCTTGCAAATGTCTGAC TTACAGCTTATGGATATTGCCCGGTTCTGTAATCGGTTTCCAAACATCGATCTGACGTAT GAGGTGCTGGACAGTGGTAATGTGAGTGCTGGAGACGATGTAAGTGTGCAGGTAACCCTT GAGCGAGATCTTGAGGGTAGAACAGAGGTTGGACCTGTTTTTGCACCTAAATATCCCAAA GCCAAGGAAGAAGGATGGTGGCTTGTTGTCGGCGATACAAAGAGCAACCAATTACTGGCC ATTAAGAGAGTAACCCTCCAAAGGAAATCTAGGGTCAAGCTAGATTTTGCTGCGCCTGCA GAAGCTGGGACGAGGACCTACACACTCTATTTCATGTGCGATTCTTATCTGGGTTGTGAC CAGGAGTATAGTTTTACACTTGATGTTAAAGCGCCAATGGGTGAAGATGACAGTGGAAGA GAATGA

Peptide Sequence

PEP ID	XP_016495725.1
PEP Infomation	PREDICTED: DExH-box ATP-dependent RNA helicase DExH12-like [Nicotiana tabacum]
Sequence	MSNLGGGAEAHARFKQYEYRANSSLVLTTDSRPRDTHEPSGEPESLYGKIDPKTFGDRAY KGRPPELDEKLEKARKKKERQRDPLVSEPPTRKKRRLLVQEESVLTSTEEGVYQPKTKET RAAYEAMLSMIQQQLGGQPLNIVSGAADEILAVLKNDNFKNPDKKKEIEKLLNPISNQVF DQLVSIGRLITDYQGDGDAAAVSGAGDGDEALDDDVGVAVEFEENEEEDDEESDLDVVPD DEEDDDDVLEANGSGAMQMGGGIDDDEMREADEGMALNVQDMDAYWLQRKISQAYEQQID PQQSQKLAEEVLKILAEGDDREVETKLLVHLQFDKFSLIKYLLRNRLKVVWGTRLARADE QEKKEIEEEMLGLGPDHAAILGQLHATRATPKERQKILEKSIREEARRLKDETGVDGDGE RRTAVVDRDVDNGWLLGQRQLLDLDDLAFHQGGLLMANKKCELPVGSYRNHKKGYEEVHV PALKPKPLAAGEELVKISSIPEWAQPAFSGMTQLNRVQSKVYETALFSPENILLCAPTGA GKTNVAMLTILQQIALNRNEDGSFNHNNYKIVYVAPMKALVAEVVGNLSKRLEHYGFQVK ELSGDQTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPV LESIIARTIRQIETTKEHIRLVGLSATLPNYEDVAVFLRVDLDKGLFHFDNSYRPVPLAQ QYIGITVKKPLQRFQLMNDVCYEKVISVAGKHQVLIFVHSRKETSKTARAIRDTALANDT LGKFLKEESVAREILQSHTELVKSNDLKDLLPYGFAIHHAGLVRTDRQLVEELFADGHVQ VLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEG IIITGHSELQYYLSLMNQQLPIESQFISKLADQLNAEIVLGTVLNAKEACKWLLYTYLYV RMVRNPTLYGLAADALKTDYTLEERRADLVHSAATLLDKNNLVKYDRKSGYFQVTDLGRI ASYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIP VKESLEEPSAKINVLLQAYISRLKLEGLSLSSDMVYITQSAVRLMRALFEIVLKRGWAQL AEKALKWCKMISKKMWSVQTPLRQFHGIPNEILMKLEKKDLAWERYYDLSSQELGELIRF QKMGRTLHKFIHQFPKLNLAAHVQPITRSVLRVELTITPDFQWDDKVHGFVEPFWVVVED NDGEYILHHEYFMLKKQYIDEDHTVNFTVPIYEPLPPQYFIRVVSDRWLGSQTVLPVSFR HLILPEKYPPPTELLDLQPLPVTALRNPAYEAVYQDFKHFNPVQTQVFTVLYNSDDNVLV AAPTGSGKTICAEFAILRNLQKGPDSTIRAVYIAPLEALAKERFSDWKKKFGDYLGMRVV ELTGETASDLKLLEKGQLIISTPEKWDALSRRWKQRKHVQQVSLFIVDELHLIGGQGGPI LEVIVSRMRYISSQIDNKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIH IQGVDIANFEARMQAMAKPTYTAIVQHARKGKPAIVYVPTRKHARLTAVDLMTYSSMDSE DTPIFLLRSAEELEPFVERINEPMLKETLKYGVGYLHEGLSATDLDIVKTLFETGWIQVC VMNGTMCWGVPLSAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLVDNSGKCVI LCHAPRKDYYKKFLYEAFPVESHLQHYLHDNLNAEVVVGVIQNKQDAVDYLTWTFMYRRL TQNPNYYNLQGVSHRHLSDHLSELVENTISDLEASKCVAVEDDFLLSPLNLGMIASYYYI SYTTIERFSSSVTSKTKLKGLLEILASASEYEQLPIRPGEEELIRRLIKHLRFSFENPKY TDPHIKANALLQAHFSRQVLGGNLASDQQEVLLSSTRLLQAMVDVISSNGWLSLALLAME VSQMVTQGMWERDSMLLQLPHFTKDLAKKCQENPGKSVETVFDLVELEDDERRELLQMSD LQLMDIARFCNRFPNIDLTYEVLDSGNVSAGDDVSVQVTLERDLEGRTEVGPVFAPKYPK AKEEGWWLVVGDTKSNQLLAIKRVTLQRKSRVKLDFAAPAEAGTRTYTLYFMCDSYLGCD QEYSFTLDVKAPMGEDDSGRE

Transcript Sequence

Gene sequence data has not been registered.